TypeRibbon

TypeRibbon - set type of ribbons

TypeRibbon ( interpol | smooth | as_is )
    ( free | cylinder | spacing | neighbour | as_is )

Set the type of all selected ribbons. The first argument determines whether the ribbon goes through the atoms used for AddRibbon, or whether it is smoothed. The second argument determines how the ribbon is oriented.

Typically interpol/cylinder or interpol/spacing is used for helices, smooth/neighbour for sheets and smooth/free for turns and random coil.

'cylinder' does a least square fit of a cylinder surface to the atoms, 'spacing' fits a cylinder so that the spacing of atoms along the axis is as regular as possible. The results are very similar in most cases, but 'spacing' often looks better for very short helices or DNA.

The information about which residue is the neighbour of which other residue is read from the secondary structure information in PDB files or calculated by the CalcSecondary command. It can also be set with the SetNeigh command.

For both arguments, the value 'as_is' will leave the value unchanged, this is useful when one wants to change one of the values for multiple ribbons at once.

EXAMPLE

TypeRibbon smooth neighbour

ReadPdb, CalcSecondary, SetNeigh, AddRibbon, SelectPrim, LengthPrim, StyleRibbon, SizeRibbon, PaintRibbon

DATE

950307